SubtiBank SubtiBank
Version comparison:

2017-8-11 16:0:3Tue Dec 13 2016 11:16:36 GMT+0100 (CET)

proteinLength

292

geneLength

876

Gene

Coordinates

3,348,825 → 3,349,703

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A560 (yurN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/560 NBRP B. subtilis, Japan]

aminos

MVNQNKIIPYLFLVPALVFLLFVYIPIFENVFLSLFQWSSFSPEKTFIGLKNYVELFHDPVFYQALTNNVLYAVISIVCQVFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVISMTVIALLFDFIYNPETGLLNQLLQAIGLDQLTRAWLGDDSTAMLSVIFVSQWQSVGYIAMLYIVSIQKIPDELYEAARLDGAGKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYILTGGGPGKASEVLSTFLYKSAFTKDMMGYASAIATVVLIITLALSLMQMKFFKTGKEE

[SW|Categories] containing this gene/protein

[SW|ABC transporters], [SW|utilization of specific carbon sources], [SW|utilization of nitrogen sources other than amino acids], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

3,348,825 -> 3,349,703

The protein

[SW|Interactions]

[[protein|YurJ]]-([[protein|FrlM]]-[[protein|FrlN]])-[[protein|FrlO]] [Pubmed|10092453]

Expression and Regulation

Operon

''[[protein|frlB]]-[[protein|frlO]]-[[protein|frlN]]-[[protein|frlM]]-[[protein|frlD]]'' [Pubmed|23175651,21347729]

Expression and Regulation

Regulation

'' [[protein|frlB]]'': repressed during growth in the presence of branched chain amino acids ([[protein|CodY]]) [Pubmed|12618455]

''[[protein|frlB]]'': induced in the presence of fructosamine ([[protein|FrlR]]) [Pubmed|21398478]

Expression and Regulation

Regulatory mechanism

[[protein|CodY]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12618455 PubMed1], [http://www.ncbi.nlm.nih.gov/sites/entrez/18083814 PubMed2]

[[protein|FrlR]]: transcription repression [Pubmed|21398478]

Expression and Regulation

Additional information

the mRNA is substantially stabilized upon depletion of [[Rny|RNase Y]] [PubMed|21815947]

the ''[[protein|frlB]]-[[protein|frlO]]-[[protein|frlN]]-[[protein|frlM]]-[[protein|frlD]]'' operon is not expressed in a ''[SW|cshA]'' mutant [PubMed|23175651]

the ''[[protein|frlB]]-[[protein|frlO]]-[[protein|frlN]]-[[protein|frlM]]-[[protein|frlD]]'' operon is not expressed in the presence of [SW|NusA] [http://www.nature.com/articles/nmicrobiol20157 Reference]